Users interested in U-gene software analysis generally download:
UGENE is a free cross-platform genome analysis suite.
It works perfectly on Windows, Mac OS or Linux and requires only a few clicks to install.
-Multiple sequence alignment using MUSCLE 3, KAlign, Clustal;
-HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;
-Visual and interactive genome browsing including circular plasmid view;